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Publications

Google Scholar link.

  1. Galindo-Murillo R, Garcia-Ramos, JC, Ruiz-Azuara L, T. E. Cheatham III, Cortes-Guzman, F. Intercalation processes of copper complexes in DNA. Nucleic Acids Research (2015) doi: 10.1093/nar/gkv467. Link
  2. Galindo-Murillo R, Roe D, T. E. Cheatham III. On the absence of intra-helical DNA dynamics on the microsecond timescale) Nature Communications 5:5152 doi: 10.1038/ncomms6152 (2014). Link
  3. Galindo-Murillo R. Roe DR, Cheatham TE III, Convergence and reproducibility in molecular dynamics simulations of the DNA duplex d(GCACGAACGAACGAACGC). Biochimica et Biophysica Acta (BBA)-General Subjects, (In press, DOI: 10.1016/j.bbagen.2014.09.00 Link
  4. Toledano-Magana Y, Garca-Ramos J C, Torres-Gutierrez C, Vazquez-Gasser C, Esquivel-Sanchez J M, Perez-Jimenez A, Ortiz-Frade L, Galindo-Murillo R, Laclette J P, Ruiz-Azuara L, Cesar Carrero J. Metal-based drugs for neglected tropical diseases treatment. Ruthenium (II) complexes with potential amoebicidal activity. Journal of Medicinal Chemistry (Submitted)
  5. The π-back-bonding modulation and its impact in the electronic properties of Cu(II) antineoplastic compounds. Experimental and theoretical study.” performed by Juan Carlos García-Ramos, Rodrigo Galindo-Murillo, Araceli Tovar-Tovar, Ana Luisa Alonso-Saenz, Virginia Gómez-Vidales, Marcos Flores-Álamo, Luis Ortiz-Frade,Fernando Cortes-Guzmán, Rafael Moreno-Esparza,Antonio Campero and Lena Ruiz-Azuara. Chemistry- A European Journal, 2014, 20, pp 13730-13741 Link
  6. Zhenjian Lin, Michael Koch, May Hamdy Abdel Aziz, Rodrigo Galindo-Murillo, Ma Diarey Tianero, Thomas E Cheatham, Louis R Barrows, Chris A Reilly, Eric W Schmidt. Oxazinin A, a Pseudodimeric Natural Product of Mixed Biosynthetic Origin from a Filamentous Fungus. 2014, 16, pp 4774-4777 Link
  7. Galindo-Murillo R, Thomas E. Cheatham III. DNA Binding Dynamics and Energetics of Cobalt, Nickel, and Copper Metallopeptides. ChemMedChem 9 (6), 1252-1259. Link
  8. Galindo-Murillo R, Alberto Olmedo-Romero, Eduardo Cruz-Flores, P.M. Petrar, Sandor Kunsagi-Mate, Joaquín Barroso-Flores, Calix[n]arene-based drug carriers: A DFT study of their electronic interactions with a chemotherapeutic agent used against leukemia, Computational and Theoretical Chemistry, Volume 1035, 1 May 2014, Pages 84-91. Link
  9. Galindo-Murillo R, María Eugenia Sandoval-Salinas, and Joaquín Barroso-Flores. In Silico Design of Monomolecular Drug Carriers for the Tyrosine Kinase Inhibitor Drug Imatinib Based on Calix- and Thiacalix[n]arene Host Molecules: A DFT and Molecular Dynamics Study. Journal of Chemical Theory and Computation 2014 10 (2), 825-834 Link
  10. Garca-Ramos J C, Galindo-Murillo R, Cortes-Guzman F, Ruiz-Azuara L. Metal-based drug-DNA interactions. Journal of the Mexican Chemical Society 2013 Aug 28;57(3):245-259. Link
  11. Bergonzo C, Galindo-Murillo R, T. E. Cheatham, III. Molecular modeling of nucleic acid structure:
    Electrostatics and Solvation. Protocols in Nucleic Acid Chemistry. (Wiley: New York) 7.9.1-7.9.22
    (2013)
  12. Bergonzo C, Galindo-Murillo R, T. E. Cheatham, III. Molecular modeling of nucleic acid structure:
    Energy and Sampling. Protocols in Nucleic Acid Chemistry. (Wiley: New York) 7.8.1-7.8.21
    (2013). Link
  13. Galindo-Murillo R, Bergonzo C, T. E. Cheatham, III. Molecular modeling of nucleic acid structure.
    Protocols in Nucleic Acid Chemistry. (Wiley: New York) 7.5.1-7.5.12 (2013). Link
  14. Valencia-Cruz AI, Uribe-Figueroa LI, Galindo-Murillo R, Baca-Lopez K, Gutierrez AG, Vazquez-
    Aguirre A, Ruiz-Azuara L, Hernandez-Lemus E, Meja C. Whole genome gene expression analysis
    reveals Casiopena-induced apoptosis pathways. PLoS One. 2013;8(1). Link
  15. Galindo-Murillo R, Ruiz-Azuara L, Moreno-Esparza R, Cortes-Guzman F. Molecular recognition
    between DNA and a copper-based anticancer complex. Physical Chemistry Chemical Physics. 2012
    Nov 28;14(44):15539-46. Link
  16. Galindo-Murillo R, Hernandez-Lima J, Gonzales-Rendon M, Cortes-Guzman F, Ruiz-Azuara L,
    Moreno-Esparza R. Stacking betwen Casiopeinas and DNA bases. Physical Chemistry Chemical
    Physics. 2011 Aug 28;13(32):14510-5. Link